Publications
Browse the list below to see the latest scientific publications stemming from our institute faculty’s work. To view publications of specific AI faculty, please visit Membership and select a profile link.
- Kruzan KP, Ammerman B, Lengel GJ, Griffith JW, Lucas K, Nguyen T, Rushton K, Washburn JJ, Mohr DC Development and initial test of an online self-assessment of nonsuicidal self-injury severity. J Affect Disord 2025 Oct 15;387:119506. doi:10.1016/j.jad.2025.119506
- Cai FY, Mao C, Luo Y Constrained Tensor Factorization for Cancer Phenotyping and Mortality Prediction. Stud Health Technol Inform 2025 Aug 07;329:871-875. doi:10.3233/SHTI250964
- Khan SS, Harrington RA, Ahmad FS Blood Pressure Measurement in Retail Stores and Population Health. JAMA Cardiol 2025 Aug 06;. doi:10.1001/jamacardio.2025.2492
- Vaduganathan M, Claggett BL, Udell JA, Desai AS, Jhund PS, Henderson AD, Lay-Flurrie J, Amarante F, Glasauer A, Lam CSP et al. Blinded Withdrawal of Finerenone After Long-Term Treatment in the FINEARTS-HF Trial. J Am Coll Cardiol 2025 Aug 05;86(5):396-399. doi:10.1016/j.jacc.2025.05.038
- Luo Z, Xia M, Shi W, Zhao C, Wang J, Xin D, Dong X, Xiong Y, Zhang F, Berry K et al. Retraction Note: Human fetal cerebellar cell atlas informs medulloblastoma origin and oncogenesis. Nature 2025 Aug;644(8075):290. doi:10.1038/s41586-025-09015-w
- Ding Y, He B, Bogush D, Schramm J, Singh C, Dovat K, Randazzo J, Tukaramrao D, Hengst J, Annageldiyev C et al. Critical roles of IKAROS and HDAC1 in regulation of heterochromatin and tumor suppression in T-cell acute lymphoblastic leukemia. Leukemia 2025 Aug;39(8):2010-2020. doi:10.1038/s41375-025-02651-1
- Klein L, Fudim M, Etemadi M, Gordon R, Tibrewala A, Hernandez-Montfort J, McCann P, Zier L, Shah K, Rollins A et al. Noninvasive Pulmonary Capillary Wedge Pressure Estimation in Heart Failure Patients With the Use of Wearable Sensing and AI. JACC Heart Fail 2025 Aug;13(8):102513. doi:10.1016/j.jchf.2025.102513
- Ostrominski JW, Filippatos G, Claggett BL, Miao ZM, Desai AS, Jhund PS, D Henderson A, Scheerer MF, Rohwedder K, Amarante F et al. Efficacy and Safety of Finerenone in Heart Failure With Preserved Ejection Fraction: A FINE-HEART Analysis. JACC Heart Fail 2025 Aug;13(8):102497. doi:10.1016/j.jchf.2025.03.041
- Ozyoruk KB, Harmon SA, Yilmaz EC, Gelikman DG, Bagci U, Simon BD, Merino MJ, Lis R, Gurram S, Wood BJ et al. Impact of AI-Generated ADC Maps on Computer-Aided Diagnosis of Prostate Cancer: A Feasibility Study. Acad Radiol 2025 Aug;32(8):4621-4630. doi:10.1016/j.acra.2025.05.041
- Agha E, Sutter C, Ojewuyi I, Abramsohn EM, Andriano M, Bell C, Calix AL, Cherry JL, Downing K, Flower T et al. The Grief Navigation Trial: A multi-site pragmatic comparative effectiveness trial of two interventions to support parents after their child's unexpected or traumatic death. Contemp Clin Trials 2025 Aug;155:107962. doi:10.1016/j.cct.2025.107962
- Hoffmann AD, Almubarak HF, Iyer R, Weinberg SE, Squires JR, Mao C, Wei J, Chaudhuri S, El-Shennawy L, Dashzeveg NK et al. Identification of immune signatures associated with both SARS-CoV-2 infection and lung transplantation. Cell Rep Med 2025 Jul 29;:102262. doi:10.1016/j.xcrm.2025.102262
- Chaudhary RS, Hussain SMD, Wang YS, Komtebedde J, Hasenfuß G, Borlaug BA, Kaye DM, Cleland JGF, Leon MB, Shah SJ et al. Expanded Definition of Worsening Heart Failure: Impact on Clinical Outcomes and Quality-of-Life Assessment. JACC Heart Fail 2025 Jul 25;13(9):102571. doi:10.1016/j.jchf.2025.102571
- Yaku H, Sauer AJ, Patel S, O'Keefe EL, Borlaug BA, Kitzman DW, Windsor SL, Khumri T, Umpierrez G, Kosiborod MN et al. Orthostatic Pulse Pressure as a Potential Indicator of Preload Insufficiency in HFpEF: Insights From PRESERVED-HF. JACC Heart Fail 2025 Jul 25;13(9):102566. doi:10.1016/j.jchf.2025.102566
- Saleiro D, Wen JQ, Zannikou M, Lee B, Kosciuczuk EM, Nehlsen SD, Munshi A, Chen X, Oku CV, Hryhorysak B et al. Loss of Function Mouse Models Reveal a Novel Regulatory Function for ULK1 in Myeloproliferative Neoplasms. Mol Cell Biol 2025 Jul 23;:1-24. doi:10.1080/10985549.2025.2529837
- Yaku H, Shah SJ The Key Role of Diagnostic Imaging in Early HFpEF. JACC Cardiovasc Imaging 2025 Jul 17;. pii:S1936-878X(25)00306-7
- Wang MC, Dolan B, Huang X, Freaney PM, Freed BH, Vega L, Markoski N, Wainright A, Kane B, Seegmiller LE et al. Feasibility of the Implementation of Tools for Heart Failure Risk Prediction: A Randomized Controlled Pilot Trial. JACC Adv 2025 Jul 14;4(8):102004. pii:102004
- Prasad D, Khandeshi A, Sartin S, Jain R, Dahdaleh N, Lesniak M, Luo Y, Ahuja C Will AI become our Co-PI? NPJ Digit Med 2025 Jul 14;8(1):440. pii:440
- Fass OZ, Kristinsdottir K, Kaklamanos E, Soni P, Hudson K, Etemadi M, Pandolfino JE, Carlson DA Improved Performance of an Updated Artificial Intelligence Model for Interpretation of Functional Lumen Imaging Probe Panometry Studies. Neurogastroenterol Motil 2025 Jul 13;:e70120. doi:10.1111/nmo.70120
- Wang X, Li Y, Lin Z, Pla I, Gajjela R, Mattamana BB, Joshi M, Liu Y, Wang H, Zun AB et al. Microtopography-induced changes in cell nucleus morphology enhance bone regeneration by modulating the cellular secretome. Nat Commun 2025 Jul 11;16(1):6444. pii:6444
- Rosenthal EA, Wei WQ, Luo Y, Namjou-Khales B, Schaid DJ, Esplin ED, Lape M, Kottyan L, Pacheco JA, Weng C et al. Phenome-wide association study identifies multiple traits associated with a polygenic risk score for colorectal cancer. Hum Genomics 2025 Jul 09;19(1):77. pii:77
- Mithal LB, Becker ME, Ling-Hu T, Goo YA, Otero S, Kremer A, Pandey S, Lancki N, Li Y, Luo Y et al. Cord blood proteomics identifies biomarkers of early-onset neonatal sepsis. JCI Insight 2025 Jul 08;10(13). pii:e193826
- Yaku H, Burkhoff D, Borlaug BA, Lala A, Butler J, Rich S, Shah SJ Oral Levosimendan for the Treatment of Pulmonary Hypertension due to Heart Failure With Preserved Ejection Fraction: Rationale and Design of the LEVEL Trial. J Card Fail 2025 Jul 07;. pii:S1071-9164(25)00293-3
- Hourmozdi J, Easton N, Benigeri S, Thomas JD, Narang A, Ouyang D, Duffy G, Upton R, Hawkes W, Akerman A et al. Evaluating the Performance and Potential Bias of Predictive Models for Detection of Transthyretin Cardiac Amyloidosis. JACC Adv 2025 Jul 04;4(8):101901. pii:101901
- Yaku H, Eicher JC, Bergmann MW, Kister T, Pörner TC, Borlaug BA, Mohan RC, Price M, Komtebedde J, Shah SJ Management of Flow Reversal in Patients With Atrial Shunts Implanted to Reduce Left Atrial Pressure. JACC Case Rep 2025 Jul 02;30(17):103893. doi:10.1016/j.jaccas.2025.103893
- Naved BA, Ravishankar S, Colbert GE, Johnston A, Slott QM, Luo Y LLM enabled classification of patient self-reported symptoms and needs in health systems across the USA. NPJ Digit Med 2025 Jul 01;8(1):390. pii:390
- Pabon MA, Vardeny O, Vaduganathan M, Desai AS, Claggett BL, Kulac IJ, Jhund PS, Lam CSP, Senni M, Shah SJ et al. Finerenone in Heart Failure With Improved Ejection Fraction: The FINEARTS-HF Randomized Clinical Trial. JAMA Cardiol 2025 Jul 01;10(7):740-745. doi:10.1001/jamacardio.2025.1101
- Barrett MA, Allen A, Vuong VT, Zhu D, Rainey AJ, McConnell WM, Kho AN, Salisbury A, French DD Impact of an Artificial Intelligence and Machine Learning Enhanced Electronic Health Record System on Quality Measures in Nursing Homes: A Difference-in-Differences Analysis. J Am Med Dir Assoc 2025 Jul;26(7):105680. doi:10.1016/j.jamda.2025.105680
- Dennis S, Tsukioki T, Kocherginsky M, Qi AK, DeHorn S, Gurley M, Wrubel E, Luo Y, Khan SA Neoadjuvant Chemotherapy Response and Genetic Susceptibility in Recently Parous Women with Breast Cancer: A Retrospective Analysis. Ann Surg Oncol 2025 Jul;32(7):4855-4864. doi:10.1245/s10434-025-17204-0
- Matsumoto S, Henderson AD, Jhund PS, Bauersachs J, Chioncel O, Claggett BL, Comin-Colet J, Desai AS, Filippatos G, Lam CSP et al. Finerenone and Atrial Fibrillation in Heart Failure: A Secondary Analysis of the FINEARTS-HF Randomized Clinical Trial. JAMA Cardiol 2025 Jul 01;10(7):696-707. doi:10.1001/jamacardio.2025.0848
- Li M, Fass OZ, Carlson DA, Pitisuttithum P, Goudie E, Kristinsdottir K, Kaklamanos E, Etemadi M, Keswani RN, Ellison A et al. Endoscopic Prediction of Achalasia: Putting the CART Before the CARS. Neurogastroenterol Motil 2025 Jul;37(7):e70024. pii:e70024
- Hosseini M, Holcombe AO, Kovacs M, Zwart H, Katz DS, Holmes K Group authorship, an excellent opportunity laced with ethical, legal and technical challenges. Account Res 2025 Jul;32(5):762-784. doi:10.1080/08989621.2024.2322557
- Herrold AA, Aaronson AL, Bhaumik D, Durazzo T, Livengood SL, Ramic A, Riordan P, Jordan N, Parrish T, Mallinson T et al. A Customized Neural Transcranial Magnetic Stimulation Target for Functional Disability Among Veterans With Co-Occurring Alcohol Use Disorder and Mild Traumatic Brain Injury: Protocol for a Pilot Randomized Controlled Trial. JMIR Res Protoc 2025 Jun 23;14:e64909. pii:e64909
- Butt JH, Jhund PS, Henderson AD, Claggett BL, Chiang CE, Linssen GCM, Saldarriaga CI, Saraiva JFK, Sato N, Schou M et al. Finerenone According to Frailty in Heart Failure: A Prespecified Analysis of the FINEARTS-HF Randomized Clinical Trial. JAMA Cardiol 2025 Jun 18;. pii:e251775
- Bisen JB, Sikora H, Aneja A, Shah SJ, Mirza RG Retinal Imaging as a Window into Cardiovascular Health: Towards Harnessing Retinal Analytics for Precision Cardiovascular Medicine. J Cardiovasc Dev Dis 2025 Jun 17;12(6). pii:230
- Li Y, Ding Y, Dennis S, Hutch MR, Zhou J, Zhou Y, Li Y, Pillai M, Ghotbaldini S, Garcia MA et al. SOAR elucidates biological insights and empowers drug discovery through spatial transcriptomics. Sci Adv 2025 Jun 13;11(24):eadt7450. doi:10.1126/sciadv.adt7450
- Dennis SR, Tsukioki T, Cottone G, Zhou W, Ganz PA, Sehl ME, Luo Y, Khan SA, Clare S DNA methylation patterns in breast cancer, paired benign tissue from ipsilateral and contralateral breast, and healthy controls. Breast Cancer Res 2025 Jun 11;27(1):103. pii:103
- Doiron JE, Elbatreek MH, Xia H, Yu X, Gehred ND, Gromova T, Chen J, Driver IH, Muraoka N, Jensen M et al. Hydrogen Sulfide Deficiency and Therapeutic Targeting in Cardiometabolic HFpEF: Evidence for Synergistic Benefit With GLP-1/Glucagon Agonism. JACC Basic Transl Sci 2025 Jun 04;:101297. doi:10.1016/j.jacbts.2025.04.011
- Huang J, Wittbrodt MT, Teague CN, Karl E, Galal G, Thompson M, Chapa A, Chiu ML, Herynk B, Linchangco R et al. Efficiency and Quality of Generative AI-Assisted Radiograph Reporting. JAMA Netw Open 2025 Jun 02;8(6):e2513921. pii:e2513921
- Rambarat P, DeVore AD, Bhatt AS, Allen LA, McIlvennan CK, Cotter G, Mukhopadhyay A, Ahmad T, Ahmad FS, Psotka MA Failure to Launch: Insights From Randomized Trials on Implementation Strategies for Guideline-Directed Therapies for Heart Failure. JACC Heart Fail 2025 Jun;13(6):887-900. doi:10.1016/j.jchf.2025.02.023
- Sehgal S, Starren J, Cattin K, Bilaver L, Gururaj A, Togias A, Gupta RS Common data elements for food allergy clinical trials: an overview. Curr Opin Allergy Clin Immunol 2025 Jun 01;25(3):194-198. doi:10.1097/ACI.0000000000001075
- Brokamp E, Miller-Fleming T, Scalici A, Hooker G, Hamid R, Velez Edwards D, Chung WK, Luo Y, Kiryluk K, Limidi NA et al. Systematic method for classifying multiple congenital anomaly cases in electronic health records. Genet Med 2025 Jun;27(6):101415. doi:10.1016/j.gim.2025.101415
- Sandlow S, Carbunaru S, Sun Z, Ofori B, Liu Y, Li E, Hollowell CMP, Vidal P, Perry KT, Patel HD et al. Negative Predictive Value of a Prostate MRI in Black Men: Implications for Biopsy Decision-Making. J Urol 2025 Jun;213(6):713-721. doi:10.1097/JU.0000000000004498
- Armoundas AA, Ahmad FS, Attia ZI, Doudesis D, Khera R, Kyriakoulis KG, Stergiou GS, Tang WHW Controversy in Hypertension: Pro-Side of the Argument Using Artificial Intelligence for Hypertension Diagnosis and Management. Hypertension 2025 Jun;82(6):929-944. doi:10.1161/HYPERTENSIONAHA.124.22349
- Pandey A, Lewis GD, Borlaug BA, Shah SJ, Sauer AJ, Litwin S, Sharma K, Jorkasky DK, Tarka EA, Khan SM et al. Novel Controlled Metabolic Accelerator for Obesity-Related HFpEF: The HuMAIN-HFpEF Randomized Clinical Trial. JAMA Cardiol 2025 Jun 01;10(6):609-616. doi:10.1001/jamacardio.2025.0103
- Tavolinejad H, Boczar KE, Spronck B, Maynard H, Bertoni AG, Shah SJ, Chirinos JA Determinants of Cardio-Ankle Vascular Index and Heart-Thigh β Index in the MESA. Hypertension 2025 Jun;82(6):1081-1094. doi:10.1161/HYPERTENSIONAHA.124.23970
- McDowell K, Docherty KF, Campbell RT, Henderson AD, Jhund PS, Claggett BL, Desai AS, Lay-Flurrie J, Hofmeister L, Scalise A et al. Finerenone for Heart Failure and Risk Estimated by the PREDICT-HFpEF Model: A Secondary Analysis of FINEARTS-HF. JAMA Cardiol 2025 Jun 01;10(6):535-544. doi:10.1001/jamacardio.2025.0025
- Ambrosy AP, Sauer AJ, Patel S, Windsor SL, Borlaug BA, Husain M, Inzucchi SE, Kitzman DW, McGuire DK, Shah SJ et al. Baseline kidney function and the effects of dapagliflozin on health status in heart failure in DEFINE-HF and PRESERVED-HF. ESC Heart Fail 2025 Jun;12(3):1676-1681. doi:10.1002/ehf2.15184
- Michelson KN, Fishman AC, Feinberg EC, Ross S, Wald HS, Auerbach C, Roth S Antisemitism in American Healthcare: A Survey Study of Reported Experiences. J Gen Intern Med 2025 Jun;40(8):1940-1943. doi:10.1007/s11606-024-09159-x
- Hasjim BJ, Mohammadi M, Balbale SN, Paukner M, Banea T, Shi H, Furmanchuk A, VanWagner LB, Zhao L, Duarte-Rojo A et al. High Hospitalization Rates and Risk Factors Among Frail Patients With Cirrhosis: A 10-year Population-based Cohort Study. Clin Gastroenterol Hepatol 2025 Jun;23(7):1152-1163. doi:10.1016/j.cgh.2024.08.044
- Goldstein JA, Nateghi R, Cooper LAD Machine Learning Assessment of Gestational Age in Accelerated Maturation, Delayed Maturation, Villous Edema, Chorangiosis, and Intrauterine Fetal Demise. Arch Pathol Lab Med 2025 Jun 01;149(6):503-510. doi:10.5858/arpa.2024-0274-OA