Trainee Publications
Bolded authors are Chicago KUH FORWARD Trainees.
2024
Larmore M, Esarte Palomero O, Kamat N, DeCaen PG. A synthetic method to assay polycystin channel biophysics. Elife. 2024 Oct 28;13. doi: 10.7554/eLife.98534. PubMed PMID: 39466685; PubMed Central PMCID: PMC11517255.
Márquez-Nogueras KM, Elliott B, Thuo, P, DiNello E, Knutila RM, Fritzmann GE, Vuchkovska V, Flury S, Willis M, Chapman AB, Cao Q, Barefield DY, Kuo IY. Cardiac Localized Polycystin-2 in the Natriuretic Peptide Signaling Pathway and Hypertension. JASN 2024 Sep 20, 2024. | DOI: 10.1681/ASN.0000000000000490; https://journals.lww.com/jasn/abstract/9900/cardiac_localized_polycystin_2_in_the_natriuretic.422.aspx
Paik NY, Neethling J, Anwar M, Gupta P, Sanborn MA, Shen Z, Bandara T, Hyun J, Naiche LA, Kitajewski JK, Rehman J, Shin JW, Mehta D, Pajcini KV. Notch transcriptional target tmtc1 maintains vascular homeostasis. Cellular and molecular life sciences : CMLS. 2024 August 27;81(1):370. PubMed PMID: 39190102; PubMed Central PMCID: PMC11349727; DOI: 10.1007/s00018-024-05407-9. https://pubmed.ncbi.nlm.nih.gov/39190102/
Juliar BA, Stanaway IB, Sano F, Fu H, Smith KD, Akilesh S, Scales SJ, El Saghir J, Bhatraju PK, Liu E, Yang J, Lin J, Eddy S, Kretzler M, Zheng Y, Himmelfarb J, Harder JL, Freedman BS. Interferon-γ induces combined pyroptotic angiopathy and APOL1 expression in human kidney disease. Cell Rep. 2024 Jun 25;43(6):114310. doi: 10.1016/j.celrep.2024.114310. Epub 2024 Jun 4. PMID: 38838223; PMCID: PMC11216883: https://pubmed.ncbi.nlm.nih.gov/38838223/
Nies JF, Hendrix C, Bartram MP, Spear R, Hagmann H, Benzing T, Kubacki T. Effectiveness and safety of immunoadsorption as a rescue treatment of inflammatory myopathies: report of three cases and literature review. Therapeutic advances in musculoskeletal disease. 2024;16:1759720X241250238. PubMed PMID: 38764488; PubMed Central PMCID: PMC11102671; DOI: 10.1177/1759720X241250238. https://pubmed.ncbi.nlm.nih.gov/38764488/
Du J, Khemmani M, Halverson T, Ene A, Limeira R, Tinawi L, Hochstedler-Kramer BR, Noronha MF, Putonti C, Wolfe AJ. Cataloging the phylogenetic diversity of human bladder bacterial isolates. Genome Biol. 2024 Mar 21;25(1):75. doi: 10.1186/s13059-024-03216-8. PMID: 38515176; PMCID: PMC10958879. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-024-03216-8
Márquez-Nogueras K, Bovo E, Neczypor J, Cao Q, Zima A, Kuo I. Utilization of the genetically encoded calcium indicator Salsa6F in cardiac applications. 2024 May 119, 102873; doi:10.1016. Epub 2024 Mar 20. https://www.sciencedirect.com/science/article/pii/S0143416024000319
Vellky JE, Wu Y, Moline D, Drnevich J, Maienschein-Cline M, Valyi-Nagy K, Kajdacsy-Balla A, Vander Griend DJ. Single-cell RNA sequencing of human prostate basal epithelial cells reveals zone-specific cellular populations and gene expression signatures. J Pathol. 2024 Feb;262(2):212-225. doi: 10.1002/path.6227. Epub 2023 Nov 20. PMID: 37984408; PMCID: PMC10842206. https://pathsocjournals.onlinelibrary.wiley.com/doi/10.1002/path.6227
2023
Kremer LE, Chapman AB, Armato SG 3rd. Magnetic resonance imaging preprocessing and radiomic features for classification of autosomal dominant polycystic kidney disease genotype. J Med Imaging (Bellingham). 2023 Nov;10(6):064503. doi: 10.1117/1.JMI.10.6.064503. Epub 2023 Dec 27. PMID: 38156331; PMCID: PMC10752557. https://pubmed.ncbi.nlm.nih.gov/38156331/
Hochstedler-Kramer BR, Ene A, Putonti C, Wolfe AJ. Comparative genomic analysis of clinical Enterococcus faecalis distinguishes strains isolated from the bladder. BMC Genomics. 2023 Dec 7;24(1):752. doi: 10.1186/s12864-023-09818-z. PMID: 38062354; PMCID: PMC10701997. https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-023-09818-z
Li Z, Chen L, Sepulveda M, Wang P, Rasic M, Tullius SG, Perkins D, Alegre ML. Microbiota-dependent and -independent effects of obesity on transplant rejection and hyperglycemia. Am J Transplant. 2023 Jun 23:S1600-6135(23)00542-7. https://www.sciencedirect.com/science/article/pii/S1600613523005427
Bishop B, Sharma S, Scott EA. Nanomedicine in kidney disease. Curr Opin Nephrol Hypertens 32(4):p 366-376, July 2023. DOI: 10.1097/MNH.0000000000000897
Ng LC, Harris BJ, Larmore M, Ta MC, Vien TN, Tokars VL, Yarov-Yarovoy V, DeCaen PG. Energetic landscape of polycystin channel gating. EMBO Rep. 2023 Jul 5;24(7):e56783. doi: 10.15252/embr.202356783. Epub 2023 May 9. PMID: 37158562; PMCID: PMC10328073.
Márquez-Nogueras KM, Vuchkovska V, Kuo IY. Calcium signaling in polycystic kidney disease- cell death and survival. Cell Calcium. 2023 Jun;112:102733. https://www.sciencedirect.com/science/article/pii/S0143416023000453?via%3Dihub
Márquez-Nogueras KM, Kuo IY. Cardiovascular perspectives of the TRP channel polycystin 2. J Physiol. 2023 Jun 13. https://physoc.onlinelibrary.wiley.com/doi/10.1113/JP283835
Ally, SA, Han, J, Sun, R, Molokie, RE, Gordeuk, VR, Lash, JP, & Saraf, SL. Community-level socioeconomic distress is associated with nutritional status in adults with sickle cell anemia. eJHaem. 2023; 1– 5. https://doi.org/10.1002/jha2.661
Esarte Palomero O, Larmore M, DeCaen PG. Polycystin Channel Complexes. Annu Rev Physiol. 2023 Feb 10;85:425-448. doi: 10.1146/annurev-physiol-031522-084334. PMID: 36763973. https://pubmed.ncbi.nlm.nih.gov/36763973/
Li, Z, Rasic, M, Kwan, M, Sepulveda, M, McIntosh, C, Shastry, V., Chen, L, Finn, P, Perkins, D, & Alegre, ML. Oral administration of the commensal Alistipes onderdonkii prolongs allograft survival, American Journal of Transplantation. 2023; ISSN 1600-6135, https://doi.org/10.1016/j.ajt.2022.11.011
2022
Moline, DC, Zenner, ML, Burr, A, Vellky, JE, Nonn, L, & Vander Griend, & DJ. Single-cell RNA-Seq identifies factors necessary for the regenerative phenotype of prostate luminal epithelial progenitors. American journal of clinical and experimental urology. 2022; 10(6), 425–439. PMID: 36636696; PMCID: PMC9831919. https://europepmc.org/article/pmc/pmc9831919
Márquez-Nogueras KM, Vuchkovska V, DiNello E, Osorio-Valencia S, Kuo IY. Polycystin-2 (PC2) is a key determinant of in vitro myogenesis. American journal of physiology. Cell physiology. 2022 Aug 1; 323(2):C333-C346. https://doi.org/10.1152/ajpcell.00159.2021. PMID: 35675637; PMCID: PMC9291421.
Hochstedler-Kramer B, Joyce C, Abdul-Rahim O, Barnes HC, Mueller ER, Wolfe AJ, Brubaker L and Burnett LA (2022) One Size Does Not Fit All: Variability in Urinary Symptoms and Microbial Communities. Front. Urol. 2:890990. doi: 10.3389/fruro.2022.890990 Frontiers | One Size Does Not Fit All: Variability in Urinary Symptoms and Microbial Communities (frontiersin.org)