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Instruments:
Laser
Scanning Confocal
Photo-activation
& Conversion
Spinning
Disc Confocal
Fluor.
Emission Fingerprinting
Total
Internal Reflection Fluor.
Axioskop Fluo. Microscope
Microinjector
Rotary Shadowing System
Ultramicrotomes
Trans. Electron Microscopes
Softwares:
MetaMorph
6.0
Volocity
2.0
Zeiss LSM 510
Software
Zeiss Image Examiner
Resources:
Publications
Links
Technical Tips
References
and Books
Web Design: Teng-Leong
Chew
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Fluorescent Emission Fingerprinting on Zeiss META
Transients of calcium ions in the salivary glands of
the blow fly.
Video clip reproduced with the kind permission from Carl Zeiss, Inc.
Conventional fluorescent microscopes rely on combination of filters to
allow only the desired wavelengths to reach the camera or PMTs. The
increasing number of fluorophores used by cell biologists inevitably
narrows the gap between emission peaks of various fluorescent molecules.
This means that many commonly used fluorophores have overlapping spectra,
contributing to crosstalk between channels used in regular fluorescent
microscope. Investigators who routinely examine thick tissue samples using
fluorescent microscopy will notice the tremendous background
autofluorescence from tissues. These problems pose great challenge to the
successful and accurate interpretation of fluorescent imaging data.
The recent breakthrough in the technology of fluorescent emission
fingerprinting provides a solution to these problems. The capability of the
META module, fitted on the LSM510 laser scanning confocal microscope, to
detect the full spectra of multiple fluorophores simultaneously means that
users can generate a library of reference spectra, such as those shown
below. These spectra will include the distinct spectral signature from
tissue background autofluorescence. Please consult the page on technical
tips for dealing with tissue sample autofluorescence.
In addition to Z-stack, LSM510 META is also capable of generating a lambda
stack with spectral distributions of fluorescent emissions. In the example
above, the lambda stack displays four different color in a mixture of
fluorescent beads.
The users can then make and store reference spectral library by first identifying
the region of interest (ROI) in the pictures, the spectra of which will be
extracted in a spectral read-out as shown below:
Finally, by performing a function called linear unmixing, users can separate
these highly overlapping spectra (even GFP and FITC) into different channels.
The ability to spectrally establish emission characteristics is a critically
important breakthorugh for researchers who need to use immunofluorescence in
tissue with severe auto-fluorescence background. The autofluorescence can now
be extracted from the rest of the useful signal, thus allowing accurate
quantification of fluorescent intensity.
An example of the practical use of META is shown below:
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Total
fluorescence from tissue biopsy sample. Sample was stained with TOTO
(green nuclear stain), and Cy-5 labeled anti-Ki67. |
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Combination
of all fluorescence after linear unmixing of every emission fingerprints
by Zeiss META system. |
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Pure
TOTO stain in the sample, separated from all tissue autofluorescence. |
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Ki-67-positive
nuclei, separated from the TOTO signal, as well as tissue
autofluorescence. |
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Left-over
autofluorescence from tissue sample, which is now separated into another
channel. |
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