Northwestern University Cell Imaging Facility

Director    Teng-Leong Chew, Ph.D.

Home User's Guide Location Scheduler Fees Workshop Contact
 

Instruments:

Laser Scanning Confocal

Photo-activation & Conversion

Spinning Disc Confocal

Fluor. Emission Fingerprinting

Nuance Spectral Unmixing System

Total Internal Reflection Fluor. 

Axioskop Fluo. Microscope

Microinjector

Rotary Shadowing System

Ultramicrotomes

Trans. Electron Microscopes

Software:

MetaMorph 6.0

Volocity 2.0

Zeiss LSM 510 Software

Zeiss Image Examiner

Resources:

Publications

Links

Technical Tips

References and Books

 

 

Web Design: Teng-Leong Chew




Zeiss LSM 510 Laser Scanning Confocal Microscope

Important Features of Zeiss LSM 510

The laser scanning confocal microscope is designed for imaging with high spatial resolution. It is not designed with temporal resolution in mind. If you need to monitor rapid biological processes, you may want to consider the spinning disc confocal system.

Z-sectioning
It is the unique feature of a confocal microscope to perform Z-section on biospecimens. This is different from image deconvolution. While deconvolution relies on mathematical algorithms to rid the image of out of focus intensity data, confocal microscope relies on a small pinhole to block out of focus light.

By varying the distance between the pinhole and the specimen, users can generate a Z-series that dissect through the specimen, as shown in the following example of a clam egg, stained with three different fluorophores.



  
Z-sectioning from top to bottom of a clam egg. Video clip courtesy of Robert Goldman's Lab

Co-localization of proteins
The LSM 510 can perform simultaneous multi-color imaging, allowing users to detect the distribution of various fluorescently-tagged proteins. The most commonly used colors are red, green and Cy5. It is also possible to perform live cell imaging using cyan(CFP)- and yellow (YFP) fluorescent proteins.

Fluorescent Resonant Energy Transfer (FRET)
The availability of excitation and detection channels for CFP-YFP means that users can perform FRET experiment to study dyanmic protein-protein interaction in live cells. Ratio-imaging of the resultant images can be performed on Zeiss LSM 510 software and also MetaMorph. Please discuss FRET experiments in details with Teng-Leong Chew. FRET analyses require many internal controls, and a lot of planning.

Photo-bleaching (FRAP and FLIP)
Zeiss LSM 510 provides user-defined, tunable photo-bleaching capability. This allows users to perform experiments such fluorescent recovery after photo-bleaching (FRAP) and fluorescent loss in photo-bleaching. These fluorescent techniques are extremely powerful in study protein trafficking in and out of various subcellular compartments. Please feel free to contact us if you are thinking about studying these moecular events.

Fluorescent Intensity Measurement
Users can measure fluorecent intensity using LSM510 at any given region of interest, as shown. It is important to note that comparing fluorescent intensity from one image to another requires internal normalization standards. Please consult the facility staff for suggestions.





Before you begin:
First time users are encouraged to contact the director of the Cell Imaging Facility (Teng-Leong Chew, 312-503-2841) to discuss the use of confocal microscopes and fluorescent imaging in general. It is not always necessary to use confocal microscope for your fluorescent imaging purposes. We now also have two different confocal systems to be used for different experiments. The laser lines of both confocal systems are different, and they may not have the correct excitation wavelengths available for the chosen fluorophores. It is crucial that you find out these information in advance.

Our LSM 510 is equipped with the following lasers:
458 nm, 477nm, 488nm, 514nm, 543nm, 633nm (This scope does not have UV excitation for DAPI, please refer to another LSM 510 META site here)
For an extensive list of fluorophore excitation and emission wavelengths, please click here.

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